Transcript: lnc-CLTRN-2:1

Basic information

LNCipedia transcript ID: lnc-CLTRN-2:1 
LNCipedia gene ID: lnc-CLTRN-2
Location (hg38): chrX:15745305-15745521
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 217 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chrX_639_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.0123 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLTRN-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM27-2:1
4.0 lnc-TMEM27-2:1
4.1 lnc-TMEM27-2:1
5.0 lnc-TMEM27-2:1
5.1 lnc-PCSK1N-183:1
5.2 lnc-CLTRN-2:1