Transcript: lnc-CLP1-3:10

Basic information

LNCipedia transcript ID: lnc-CLP1-3:10 
LNCipedia gene ID: lnc-CLP1-3
Location (hg38): chr11:57638376-57652790
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 2790 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254602.1|ENST00000530595.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.7334 non-coding 
CPAT coding probability 2.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLP1-3:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLP1-3:10
5.0 lnc-CLP1-3:10
5.1 lnc-GLYATL1-26:6
5.2 lnc-CLP1-3:10