Transcript: lnc-CLN8-9:2

Basic information

LNCipedia transcript ID: lnc-CLN8-9:2 
LNCipedia gene ID: lnc-CLN8-9
Location (hg38): chr8:1315239-1319489
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 845 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014574; NONHSAT124654
Alternative gene names: XLOC_006684; linc-DLGAP2-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLN8-9:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DLGAP2-4:2
3.1 lnc-DLGAP2-4:2
4.0 lnc-DLGAP2-4:2
4.1 ERICH1-AS1:35
5.0 ERICH1-AS1:35
5.1 lnc-DEFB106A-124:2
5.2 lnc-CLN8-9:2