Transcript: lnc-CLEC5A-1:1

Basic information

LNCipedia transcript ID: lnc-CLEC5A-1:1 
LNCipedia gene ID: lnc-CLEC5A-1
Location (hg38): chr7:141887230-141893561
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1502 bp
Exons: 11
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_2321_NR_024346
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.3962 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLEC5A-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLEC5A-1:1
4.0 lnc-CLEC5A-1:1
4.1 lnc-CLEC5A-1:1
5.0 lnc-CLEC5A-1:1
5.1 lnc-CLEC5A-1:1
5.2 lnc-CLEC5A-1:1