Transcript: lnc-CLEC20A-12:1

Basic information

LNCipedia transcript ID: lnc-CLEC20A-12:1 
LNCipedia gene ID: lnc-CLEC20A-12
Location (hg38): chr1:178479247-178482365
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 423 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000623247.1
Alternative gene names: ENSG00000279210.1; RP4-593C16.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 209.6308 coding 
CPAT coding probability 7.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CLEC20A-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ANGPTL1-12:1
4.1 lnc-ANGPTL1-12:1
5.0 lnc-ANGPTL1-12:1
5.1 lnc-SH2D1B-159:1
5.2 lnc-CLEC20A-12:1