Transcript: lnc-CLDN24-6:5

Basic information

LNCipedia transcript ID: lnc-CLDN24-6:5 
LNCipedia gene ID: lnc-CLDN24-6
Location (hg38): chr4:183333663-183334553
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 798 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00009184
Alternative gene names: XLOC_004198; linc-CLDN24-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.6771 non-coding 
CPAT coding probability 30.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLDN24-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLDN24-2:3
3.1 lnc-CLDN24-2:3
4.0 lnc-CLDN24-2:3
4.1 lnc-CLDN24-2:3
5.0 lnc-CLDN24-2:3
5.1 lnc-MTNR1A-49:5
5.2 lnc-CLDN24-6:5