Transcript: lnc-CLASP2-1:13

Basic information

LNCipedia transcript ID: lnc-CLASP2-1:13 
LNCipedia gene ID: lnc-CLASP2-1
Location (hg38): chr3:33789608-33798519
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 386 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271020.1|FTMT20900039813.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -159.9924 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLASP2-1:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLASP2-1:13
5.0 lnc-CLASP2-1:13
5.1 lnc-OSBPL10-30:8
5.2 lnc-CLASP2-1:13