Transcript: lnc-CIT-1:2

Basic information

LNCipedia transcript ID: lnc-CIT-1:2 
LNCipedia gene ID: lnc-CIT-1
Location (hg38): chr12:119387991-119594501
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 971 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000509470
Alternative gene names: ENSG00000248636


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.8702 non-coding 
CPAT coding probability 3.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CIT-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CIT-1:2
3.1 lnc-CIT-1:2
4.0 lnc-CIT-1:2
4.1 lnc-CIT-1:2
5.0 lnc-CIT-1:2
5.1 lnc-GCN1-11:3
5.2 lnc-CIT-1:2