Transcript: lnc-CIB3-6:3

Basic information

LNCipedia transcript ID: lnc-CIB3-6:3 
LNCipedia gene ID: lnc-CIB3-6
Location (hg38): chr19:16192435-16197743
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 224 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000040436.1|FTMT27300026488.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -71.2149 non-coding 
CPAT coding probability 2.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CIB3-6:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CIB3-6:3
5.0 lnc-CIB3-6:3
5.1 lnc-PALM3-67:3
5.2 lnc-CIB3-6:3