Transcript: lnc-CIB1-2:3

Basic information

LNCipedia transcript ID: lnc-CIB1-2:3 
LNCipedia gene ID: lnc-CIB1-2
Location (hg38): chr15:90368820-90397323
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 12173 bp
Exons: 7
Sources: Nielsen et al.,2014
Alternative transcript names: l_1218_NR_021493
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.3821 non-coding 
CPAT coding probability 6.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CIB1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GABARAPL3-2:2
4.0 lnc-GABARAPL3-2:2
4.1 lnc-GABARAPL3-2:2
5.0 lnc-GABARAPL3-2:2
5.1 lnc-CIB1-6:2
5.2 lnc-CIB1-2:3