Transcript: lnc-CIB1-134:1

Basic information

LNCipedia transcript ID: lnc-CIB1-134:1 
LNCipedia gene ID: lnc-CIB1-134
Location (hg38): chr15:90346533-90349447
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1883 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00023206
Alternative gene names: XLOC_011576; linc-CIB1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 261.3031 coding 
CPAT coding probability 87.19% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CIB1-134:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GABARAPL3-1:1
3.1 lnc-GABARAPL3-1:1
4.0 lnc-GABARAPL3-1:1
4.1 lnc-GABARAPL3-1:1
5.0 lnc-GABARAPL3-1:1
5.1 lnc-CIB1-4:1
5.2 lnc-CIB1-134:1