Transcript: lnc-CHTF8-2:4

Basic information

LNCipedia transcript ID: lnc-CHTF8-2:4 
LNCipedia gene ID: lnc-CHTF8-2
Location (hg38): chr16:68814330-68823526
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 562 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260798.1|ENST00000563916.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 176.5818 coding 
CPAT coding probability 6.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CHTF8-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CHTF8-2:4
5.0 lnc-CHTF8-2:4
5.1 lnc-SLC12A4-15:3
5.2 lnc-CHTF8-2:4