Transcript: lnc-CHSY1-5:7

Basic information

LNCipedia transcript ID: lnc-CHSY1-5:7 
LNCipedia gene ID: lnc-CHSY1-5
Ensembl Gene ID: ENSG00000259583
Ensembl Transcript ID: ENST00000560351
Location (hg38): chr15:100892859-100919283
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3688 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000560351.2
Alternative gene names: ENSG00000259583.2; RP11-66B24.4; AC015712.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.0185 non-coding 
CPAT coding probability 3.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHSY1-5:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CHSY1-5:7
4.1 lnc-CHSY1-5:7
5.0 lnc-CHSY1-5:7
5.1 lnc-CIB1-110:3
5.2 lnc-CHSY1-5:7