Transcript: lnc-CHSY1-5:16

Basic information

LNCipedia transcript ID: lnc-CHSY1-5:16 
LNCipedia gene ID: lnc-CHSY1-5
Ensembl Gene ID: ENSG00000278456
Ensembl Transcript ID: ENST00000615211
Location (hg38): chr15:100888472-100889106
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 635 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000615211.1
Alternative gene names: ENSG00000278456.1; RP11-66B24.9; AC015712.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -56.4832 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHSY1-5:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-LINS-7:1
4.1 lnc-CHSY1-5:16
5.0 lnc-CHSY1-5:16
5.1 lnc-CIB1-110:19
5.2 lnc-CHSY1-5:16