Transcript: lnc-CHSY1-5:12

Basic information

LNCipedia transcript ID: lnc-CHSY1-5:12 
LNCipedia gene ID: lnc-CHSY1-5
Location (hg38): chr15:100881410-100919274
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 35319 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259583.1|MICT00000123678.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 402.1679 coding 
CPAT coding probability 35.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CHSY1-5:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CHSY1-5:12
5.0 lnc-CHSY1-5:12
5.1 lnc-CIB1-110:7
5.2 lnc-CHSY1-5:12