Transcript: lnc-CHRNA7-4:1

Basic information

LNCipedia transcript ID: lnc-CHRNA7-4:1 
LNCipedia gene ID: lnc-CHRNA7-4
Location (hg38): chr15:31869875-31870746
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 872 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000022467.1|HBMT00000481024.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -105.9799 non-coding 
CPAT coding probability 15.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHRNA7-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KLF13-4:1
5.0 lnc-KLF13-4:1
5.1 lnc-SNRPN-134:1
5.2 lnc-CHRNA7-4:1