Transcript: lnc-CHMP2A-1:2

Basic information

LNCipedia transcript ID: lnc-CHMP2A-1:2 
LNCipedia gene ID: lnc-CHMP2A-1
Location (hg38): chr19:58556582-58557129
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 447 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT068458
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 94.3746 coding 
CPAT coding probability 32.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CHMP2A-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHMP2A-1:2
4.0 lnc-CHMP2A-1:2
4.1 lnc-CHMP2A-1:2
5.0 lnc-CHMP2A-1:2
5.1 lnc-ZNF772-50:2
5.2 lnc-CHMP2A-1:2