Transcript: lnc-CHIC2-2:1

Basic information

LNCipedia transcript ID: lnc-CHIC2-2:1 
LNCipedia gene ID: lnc-CHIC2-2
Location (hg38): chr4:53997095-54002348
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1656 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT096409
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.5386 non-coding 
CPAT coding probability 2.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHIC2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHIC2-2:1
4.0 lnc-CHIC2-2:1
4.1 lnc-CHIC2-2:1
5.0 lnc-CHIC2-2:1
5.1 lnc-FRYL-29:1
5.2 lnc-CHIC2-2:1