Transcript: lnc-CHI3L1-2:3

Basic information

LNCipedia transcript ID: lnc-CHI3L1-2:3 
LNCipedia gene ID: lnc-CHI3L1-2
Location (hg38): chr1:203212835-203218021
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 494 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT008875
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 173.9469 coding 
CPAT coding probability 26.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CHI3L1-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHI3L1-2:3
4.0 lnc-CHI3L1-2:3
4.1 lnc-CHI3L1-2:3
5.0 lnc-CHI3L1-2:3
5.1 lnc-MYOG-6:1
5.2 lnc-CHI3L1-2:3