Transcript: lnc-CHFR-3:2

Basic information

LNCipedia transcript ID: lnc-CHFR-3:2 
LNCipedia gene ID: lnc-CHFR-3
Location (hg38): chr12:132840405-132854104
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2412 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT032131
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1569.6005 coding 
CPAT coding probability 33.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CHFR-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POLE-1:3
4.0 lnc-CHFR-3:2
4.1 lnc-CHFR-3:2
5.0 lnc-CHFR-3:2
5.1 lnc-ANKLE2-5:2
5.2 lnc-CHFR-3:2