Transcript: lnc-CGA-2:8

Basic information

LNCipedia transcript ID: lnc-CGA-2:8 
LNCipedia gene ID: lnc-CGA-2
Location (hg38): chr6:87153169-87155221
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 271 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272008.1|FTMT22100008971.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -173.9136 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CGA-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CGA-2:8
5.0 lnc-CGA-2:8
5.1 lnc-CNR1-13:8
5.2 lnc-CGA-2:8