Transcript: lnc-CFLAR-1:6

Basic information

LNCipedia transcript ID: lnc-CFLAR-1:6 
LNCipedia gene ID: lnc-CFLAR-1
Location (hg38): chr2:201173572-201178562
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3371 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003987; NONHSAT076386
Alternative gene names: XLOC_001809; linc-CASP10-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 68.2931 coding 
CPAT coding probability 33.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CFLAR-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CASP10-1:2
3.1 lnc-CASP10-1:2
4.0 lnc-CASP10-1:2
4.1 lnc-CASP10-1:2
5.0 lnc-CASP10-1:2
5.1 lnc-CFLAR-1:4
5.2 lnc-CFLAR-1:6