Transcript: lnc-CFAP36-3:5

Basic information

LNCipedia transcript ID: lnc-CFAP36-3:5 
LNCipedia gene ID: lnc-CFAP36-3
Location (hg38): chr2:55617933-55632018
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 14086 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272606.1|MICT00000189731.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 42.298 non-coding 
CPAT coding probability 1.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CFAP36-3:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCDC104-3:11
5.0 lnc-CCDC104-3:11
5.1 lnc-PAPOLG-64:10
5.2 lnc-CFAP36-3:5