Transcript: lnc-CEP57L1-1:5

Basic information

LNCipedia transcript ID: lnc-CEP57L1-1:5 
LNCipedia gene ID: lnc-CEP57L1-1
Location (hg38): chr6:109226577-109227159
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 203 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT114386; FPKM1_group_28169_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -251.8865 non-coding 
CPAT coding probability 27.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEP57L1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf183-1:4
4.0 lnc-C6orf183-1:4
4.1 lnc-C6orf183-1:4
5.0 lnc-C6orf183-1:4
5.1 lnc-SMPD2-10:2
5.2 lnc-CEP57L1-1:5