Transcript: lnc-CEP44-1:1

Basic information

LNCipedia transcript ID: lnc-CEP44-1:1 
LNCipedia gene ID: lnc-CEP44-1
Location (hg38): chr4:174523051-174530204
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 579 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008337; NONHSAT099318
Alternative gene names: XLOC_003787; linc-ADAM29-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.363 non-coding 
CPAT coding probability 4.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEP44-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CEP44-1:1
3.1 lnc-CEP44-1:1
4.0 lnc-CEP44-1:1
4.1 lnc-CEP44-1:1
5.0 lnc-CEP44-1:1
5.1 lnc-GALNTL6-27:8
5.2 lnc-CEP44-1:1