Transcript: lnc-CEBPD-7:2

Basic information

LNCipedia transcript ID: lnc-CEBPD-7:2 
LNCipedia gene ID: lnc-CEBPD-7
Ensembl Gene ID: ENSG00000253782
Ensembl Transcript ID: ENST00000519032
Location (hg38): chr8:46930840-46934446
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 460 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000519032.1; RP11-350F16.2-001; OTTHUMT00000377397.1; NONHSAT126426
Alternative gene names: ENSG00000253782.1; RP11-350F16.2; OTTHUMG00000164137.1; AC091163.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.4799 non-coding 
CPAT coding probability 5.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEBPD-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-350F16.2.1-1:1
4.0 lnc-RP11-350F16.2.1-1:1
4.1 lnc-RP11-350F16.2.1-1:1
5.0 lnc-RP11-350F16.2.1-1:1
5.1 lnc-SFRP1-47:2
5.2 lnc-CEBPD-7:2