Transcript: lnc-CEACAM8-3:4

Basic information

LNCipedia transcript ID: lnc-CEACAM8-3:4 
LNCipedia gene ID: lnc-CEACAM8-3
Location (hg38): chr19:42507395-42510244
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2850 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_4167_NR_033747
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.048 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEACAM8-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CXCL17-3:4
4.0 lnc-CEACAM8-3:4
4.1 lnc-CEACAM8-3:4
5.0 lnc-CEACAM8-3:4
5.1 lnc-PRX-64:4
5.2 lnc-CEACAM8-3:4