Transcript: lnc-CDR2-7:1

Basic information

LNCipedia transcript ID: lnc-CDR2-7:1 
LNCipedia gene ID: lnc-CDR2-7
Location (hg38): chr16:22189013-22189990
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 978 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000028923.1|FTMT26200001400.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -236.6312 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDR2-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDR2-7:1
5.0 lnc-CDR2-7:1
5.1 lnc-SULT1A2-212:1
5.2 lnc-CDR2-7:1