Transcript: lnc-CDO1-1:6

Basic information

LNCipedia transcript ID: lnc-CDO1-1:6 
LNCipedia gene ID: lnc-CDO1-1
Location (hg38): chr5:115831488-115838312
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1211 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT103332
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 221.7893 coding 
CPAT coding probability 1.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CDO1-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDO1-1:6
4.0 lnc-CDO1-1:6
4.1 lnc-CDO1-1:6
5.0 lnc-CDO1-1:6
5.1 lnc-LOX-99:2
5.2 lnc-CDO1-1:6