Transcript: lnc-CDH6-3:1

Basic information

LNCipedia transcript ID: lnc-CDH6-3:1 
LNCipedia gene ID: lnc-CDH6-3
Location (hg38): chr5:29065244-29073222
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4804 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000509556
Alternative gene names: ENSG00000249322


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.5975 non-coding 
CPAT coding probability 8.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDH6-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDH6-3:1
3.1 lnc-CDH6-3:1
4.0 lnc-CDH6-3:1
4.1 lnc-CDH6-3:1
5.0 lnc-CDH6-3:1
5.1 lnc-CARD6-143:1
5.2 lnc-CDH6-3:1