Transcript: lnc-CDH15-2:3

Basic information

LNCipedia transcript ID: lnc-CDH15-2:3 
LNCipedia gene ID: lnc-CDH15-2
Location (hg38): chr16:89232210-89232637
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 428 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT144499
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.3688 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDH15-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF778-2:2
4.0 lnc-ZNF778-2:2
4.1 lnc-ZNF778-2:2
5.0 lnc-ZNF778-2:2
5.1 lnc-SPG7-16:2
5.2 lnc-CDH15-2:3