Transcript: lnc-CDH11-12:6

Basic information

LNCipedia transcript ID: lnc-CDH11-12:6 
LNCipedia gene ID: lnc-CDH11-12
Location (hg38): chr16:65006862-65122046
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 542 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT142962
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 41.7842 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CDH11-12:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TK2-12:6
4.0 lnc-CDH11-12:6
4.1 lnc-CDH11-12:6
5.0 lnc-CDH11-12:6
5.1 lnc-PSMB10-52:6
5.2 lnc-CDH11-12:6