Transcript: lnc-CDCA7-1:6

Basic information

LNCipedia transcript ID: lnc-CDCA7-1:6 
LNCipedia gene ID: lnc-CDCA7-1
Location (hg38): chr2:173533303-173811077
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 870 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000045543.1|MICT00000203108.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.3353 non-coding 
CPAT coding probability 5.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDCA7-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDCA7-1:6
5.0 lnc-CDCA7-1:6
5.1 lnc-UBR3-42:4
5.2 lnc-CDCA7-1:6