Transcript: lnc-CD8B2-5:1

Basic information

LNCipedia transcript ID: lnc-CD8B2-5:1 
LNCipedia gene ID: lnc-CD8B2-5
Location (hg38): chr2:106701756-106800794
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 490 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT073038; FPKM1_group_16830_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.9198 non-coding 
CPAT coding probability 2.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD8B2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C2orf40-5:4
4.0 lnc-C2orf40-5:4
4.1 lnc-C2orf40-5:4
5.0 lnc-C2orf40-5:4
5.1 lnc-SULT1C2-12:1
5.2 lnc-CD8B2-5:1