Transcript: lnc-CD8B-2:2

Basic information

LNCipedia transcript ID: lnc-CD8B-2:2 
LNCipedia gene ID: lnc-CD8B-2
Location (hg38): chr2:86930209-86930895
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 553 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1697:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 134.0591 coding 
CPAT coding probability 79.08% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CD8B-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CD8B-2:2
4.1 lnc-CD8B-2:2
5.0 lnc-CD8B-2:2
5.1 lnc-ZNF514-130:1
5.2 lnc-CD8B-2:2