Transcript: lnc-CD58-7:2

Basic information

LNCipedia transcript ID: lnc-CD58-7:2 
LNCipedia gene ID: lnc-CD58-7
Location (hg38): chr1:116229943-116280391
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1709 bp
Exons: 7
Sources: Nielsen et al.,2014
Alternative transcript names: l_121_chr1:116772564-116819091_kidney
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.8356 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD58-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP1A1OS-7:1
4.0 lnc-ATP1A1OS-7:1
4.1 lnc-ATP1A1OS-7:1
5.0 lnc-ATP1A1OS-7:1
5.1 lnc-CD58-9:1
5.2 lnc-CD58-7:2