Transcript: lnc-CCSAP-1:9

Basic information

LNCipedia transcript ID: lnc-CCSAP-1:9 
LNCipedia gene ID: lnc-CCSAP-1
Location (hg38): chr1:229263016-229271043
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 6680 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA147:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.9543 non-coding 
CPAT coding probability 20.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCSAP-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C1orf96-1:5
4.1 lnc-C1orf96-1:5
5.0 lnc-C1orf96-1:5
5.1 lnc-TRIM17-26:9
5.2 lnc-CCSAP-1:9