Transcript: lnc-CCNH-123:1

Basic information

LNCipedia transcript ID: lnc-CCNH-123:1 
LNCipedia gene ID: lnc-CCNH-123
RefSeq ID: NR_130929
Location (hg38): chr5:87318415-87323628
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5214 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_130929.1
Alternative gene names: LOC644285


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.8346 non-coding 
CPAT coding probability 50.23% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCNH-123:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ANKRD34B-123:1
5.1 lnc-ANKRD34B-123:1
5.2 lnc-CCNH-123:1