Transcript: lnc-CCL25-1:6

Basic information

LNCipedia transcript ID: lnc-CCL25-1:6 
LNCipedia gene ID: lnc-CCL25-1
Location (hg38): chr19:8005813-8032554
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 17356 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267939.1|ENCT00000201331.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 28.0539 non-coding 
CPAT coding probability 60.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCL25-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCL25-1:6
5.0 lnc-CCL25-1:6
5.1 lnc-CCL25-1:6
5.2 lnc-CCL25-1:6