Transcript: lnc-CCKAR-1:6

Basic information

LNCipedia transcript ID: lnc-CCKAR-1:6 
LNCipedia gene ID: lnc-CCKAR-1
Location (hg38): chr4:26859616-26860641
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 545 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT095890
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -91.2619 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCKAR-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCKAR-1:6
4.0 lnc-CCKAR-1:6
4.1 lnc-CCKAR-1:6
5.0 lnc-CCKAR-1:6
5.1 lnc-AFAP1-150:2
5.2 lnc-CCKAR-1:6