Transcript: lnc-CCDC8-1:2

Basic information

LNCipedia transcript ID: lnc-CCDC8-1:2 
LNCipedia gene ID: lnc-CCDC8-1
Location (hg38): chr19:46401504-46404649
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3146 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT066887
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.0073 non-coding 
CPAT coding probability 11.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC8-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC8-2:1
4.0 lnc-CCDC8-2:1
4.1 lnc-CCDC8-1:2
5.0 lnc-CCDC8-1:2
5.1 lnc-RSPH6A-14:1
5.2 lnc-CCDC8-1:2