Transcript: lnc-CCDC175-1:2

Basic information

LNCipedia transcript ID: lnc-CCDC175-1:2 
LNCipedia gene ID: lnc-CCDC175-1
Location (hg38): chr14:59504539-59510713
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 326 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000553317.1; RP11-701B16.2-002; OTTHUMT00000411637.1; NONHSAT037185
Alternative gene names: ENSG00000258782.2; RP11-701B16.2; OTTHUMG00000171095.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -409.8788 non-coding 
CPAT coding probability 2.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC175-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C14orf38-1:2
4.0 lnc-C14orf38-1:2
4.1 lnc-C14orf38-1:2
5.0 lnc-C14orf38-1:2
5.1 lnc-RTN1-5:2
5.2 lnc-CCDC175-1:2