Transcript: lnc-CCDC146-96:5

Basic information

LNCipedia transcript ID: lnc-CCDC146-96:5 
LNCipedia gene ID: lnc-CCDC146-96
Ensembl Gene ID: ENSG00000273341
Ensembl Transcript ID: ENST00000608884
Location (hg38): chr7:77416673-77425443
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 733 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608884.1
Alternative gene names: ENSG00000273341.1; RP5-899E9.1; AC004921.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -238.181 non-coding 
CPAT coding probability 1.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC146-96:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC146-4:2
4.0 lnc-CCDC146-4:2
4.1 lnc-CCDC146-4:2
5.0 lnc-CCDC146-4:2
5.1 lnc-FKBP6-96:5
5.2 lnc-CCDC146-96:5