Transcript: lnc-CCDC144A-3:2

Basic information

LNCipedia transcript ID: lnc-CCDC144A-3:2 
LNCipedia gene ID: lnc-CCDC144A-3
RefSeq ID: NR_026810
Location (hg38): chr17:16788743-16790501
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1759 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT146006; NR_026810; NR_026810.1
Alternative gene names: FAM106CP


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.623 non-coding 
CPAT coding probability 29.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC144A-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC104024.2.1-3:1
4.0 lnc-AC104024.2.1-3:1
4.1 lnc-AC104024.2.1-3:1
5.0 lnc-AC104024.2.1-3:1
5.1 lnc-GLP2R-88:1
5.2 lnc-CCDC144A-3:2