Transcript: lnc-CCAR2-3:3

Basic information

LNCipedia transcript ID: lnc-CCAR2-3:3 
LNCipedia gene ID: lnc-CCAR2-3
Location (hg38): chr8:22695392-22696489
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1098 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1833:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -201.5186 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCAR2-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-KIAA1967-3:1
4.1 lnc-KIAA1967-3:1
5.0 lnc-KIAA1967-3:1
5.1 lnc-RHOBTB2-17:3
5.2 lnc-CCAR2-3:3