Transcript: lnc-CBLN4-2:1

Basic information

LNCipedia transcript ID: lnc-CBLN4-2:1 
LNCipedia gene ID: lnc-CBLN4-2
Location (hg38): chr20:55724586-55745013
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 206 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028447; NONHSAT080434
Alternative gene names: XLOC_013806; linc-CYP24A1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.2679 non-coding 
CPAT coding probability 3.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CBLN4-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CBLN4-2:1
3.1 lnc-CBLN4-2:1
4.0 lnc-CBLN4-2:1
4.1 lnc-CBLN4-2:1
5.0 lnc-CBLN4-2:1
5.1 lnc-SPATA2-72:1
5.2 lnc-CBLN4-2:1