Transcript: lnc-CASP6-5:1

Basic information

LNCipedia transcript ID: lnc-CASP6-5:1 
LNCipedia gene ID: lnc-CASP6-5
Location (hg38): chr4:109557429-109560185
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2757 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT097788
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 71.2692 coding 
CPAT coding probability 17.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CASP6-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CASP6-5:1
4.0 lnc-CASP6-5:1
4.1 lnc-CASP6-5:1
5.0 lnc-CASP6-5:1
5.1 lnc-TIFA-24:1
5.2 lnc-CASP6-5:1