Transcript: lnc-CARMIL1-5:2

Basic information

LNCipedia transcript ID: lnc-CARMIL1-5:2 
LNCipedia gene ID: lnc-CARMIL1-5
Location (hg38): chr6:25181359-25181745
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 387 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT108142
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.3797 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CARMIL1-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC16A-5:1
4.0 lnc-LRRC16A-5:1
4.1 lnc-LRRC16A-5:1
5.0 lnc-LRRC16A-5:1
5.1 lnc-CARMIL1-6:1
5.2 lnc-CARMIL1-5:2