Transcript: lnc-CARD11-6:1

Basic information

LNCipedia transcript ID: lnc-CARD11-6:1 
LNCipedia gene ID: lnc-CARD11-6
Location (hg38): chr7:3194105-3194796
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 595 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013678; NONHSAT118846
Alternative gene names: XLOC_006340; linc-CARD11-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.4036 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CARD11-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC091801.1.1-2:1
3.1 lnc-AC091801.1.1-2:1
4.0 lnc-AC091801.1.1-2:1
4.1 lnc-AC091801.1.1-2:1
5.0 lnc-AC091801.1.1-2:1
5.1 lnc-GRIFIN-23:1
5.2 lnc-CARD11-6:1