Transcript: lnc-CAPZA1-1:1

Basic information

LNCipedia transcript ID: lnc-CAPZA1-1:1 
LNCipedia gene ID: lnc-CAPZA1-1
Location (hg38): chr1:112651551-112679394
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 587 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT005267
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.9451 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAPZA1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CAPZA1-1:1
4.0 lnc-CAPZA1-1:1
4.1 lnc-CAPZA1-1:1
5.0 lnc-CAPZA1-1:1
5.1 lnc-MOV10-6:1
5.2 lnc-CAPZA1-1:1